Electronic – Clock line of SDIO bus has worse rise/fall time than rest of bus

I don't have experience with Quartus, so treat this as general advice.

When working on paths between clock domains, timing tools expand the clocks to the least common multiple of their periods and select the closest pair of edges.

For paths from a 36 MHz clock (27.777 ns) to a 100 MHz clock (10 ns), if I did my quick calculations correctly, the closest pair of rising edges is 138.888 ns on the source clock and 140 ns on the destination clock. That's effectively a 900 MHz constraint for those paths! Depending on rounding (or for clocks with no relationship), it could come out worse than that.

There are at least three ways to write constraints for this structure. I am going to call the clocks fast_clk and slow_clk as I think that's clearer for illustration.

Option 1: disable timing with set_false_path

The easiest solution is to use set_false_path to disable timing between the clocks:

set_false_path -from [get_clocks fast_clk] -to [get_clocks slow_clk]
set_false_path -from [get_clocks slow_clk] -to [get_clocks fast_clk]

This is not strictly correct, since there are timing requirements for the synchronizer to work correctly. If the physical implementation delays the data too much relative to the control signal, then the synchronizer will not work. However, since there isn't any logic on the path, it's unlikely that the timing constraint will be violated. set_false_path is commonly used for this kind of structure, even in ASICs, where the effort vs. risk tradeoff for low-probability failures is more cautious than for FPGAs.

Option 2: relax the constraint with set_multicycle_path

You can allow additional time for certain paths with set_multicycle_path. It is more common to use multicycle paths with closely related clocks (e.g. interacting 1X and 2X clocks), but it will work here if the tool supports it sufficiently.

set_multicycle_path 2 -from [get_clocks slow_clk] -to [get_clocks fast_clk] -end -setup
set_multicycle_path 1 -from [get_clocks slow_clk] -to [get_clocks fast_clk] -end -hold

The default edge relationship for setup is single cycle, i.e. set_multicycle_path 1. These commands allow one more cycle of the endpoint clock (-end) for setup paths. The -hold adjustment with a number one less than the setup constraint is almost always needed when setting multi cycle paths, for more see below.

To constrain paths in the other direction similarly (relaxing the constraint by one period of the faster clock), change -end to -start:

set_multicycle_path 2 -from [get_clocks fast_clk] -to [get_clocks slow_clk] -start -setup
set_multicycle_path 1 -from [get_clocks fast_clk] -to [get_clocks slow_clk] -start -hold

Option 3: specify requirement directly with set_max_delay

This is similar to the effect of set_multicycle_path but saves having to think through the edge relationships and the effect on hold constraints.

set_max_delay 10 -from [get_clocks fast_clk] -to [get_clocks slow_clk]
set_max_delay 10 -from [get_clocks slow_clk] -to [get_clocks fast_clk]

You may want to pair this with set_min_delay for hold checks, or leave the default hold check in place. You may also be able to do set_false_path -hold to disable hold checks, if your tool supports it.

Gory details of edge selection for multi-cycle paths

To understand the hold adjustment that gets paired with each setup adjustment, consider this simple example with a 3:2 relationship. Each digit represents a rising clock edge:

1     2     3
4   5   6   7

The default setup check uses edges 2 and 6. The default hold check uses edges 1 and 4.

Applying a multi-cycle constraint of 2 with -end adjusts the default setup and hold checks to use the next edge after what they were originally using, meaning the setup check now uses edges 2 and 7 and the hold check uses edges 1 and 5. For two clocks at the same frequency, this adjustment makes sense — each data launch corresponds with one data capture, and if the capture edge is moved out by one, the hold check should also move out by one. This kind of constraint might make sense for two branches of a single clock if one of the branches has a large delay. However, for the situation here, a hold check using edges 1 and 5 isn't desirable, since the only way to fix it is to add an entire clock cycle of delay on the path.

The multi-cycle hold constraint of 1 (for hold, the default is 0) adjusts the edge of the destination clock uesd for hold checks backwards by one edge. The combination of 2-cycle setup MCP and 1-cycle hold MCP constraints will result in a setup check using edges 2 and 7, and a hold check using edges 1 and 4.

The plot you showed in edit #2 should only happen if there's a long "stub" somewhere hanging off your signal path. Just a wrong termination shouldn't cause this. It looks like either there's a second arm coming off the source that isn't terminated, or your probe location is in the middle of the line and the line continues quite a ways (and isn't terminated correctly) after going past the scope probe.

The step duration is about about 10 ns, indicating a stub 2.5 to 5 feet long.

After we discussed this in chat, you let me know,

So I learned two things: one, there is a pretty good digital ground plane where everything is connected so that shouldn't be much of an issue if i'm probing the connector two, there actually might be long stubs hanging off of my signal path. The [NI] digital IO card I'm using has two large sets of outputs which are brought to the PCB separately basically one connector is DATA and one connector is SENSE so on the PCB, those are two separate connectors, and they get wired together across a pretty large expanse of pcb like, 2.32 inches straight, not taking the few bends in the run into account, from the digital IO I've been measuring to the sense line it is connected to

and then later

OK, that was totally the problem. Long story short- there was totally a Y [stub].

More detail: Like I said, there was a cable for DATA, and a cable for SENSE with the lines being tied together on the PCb but since I don't really know how to use sense, or if I'll ever even really need it it was just a meter of cable running off in the opposite direction i've got 1ns rise times across a 50Ω load now and the signal even looks pretty good unterminated (or rather into high impedance)