JK Flipflop design for conveyor project

A flip-flop can only change state when there is a zero-to-one transition in the incoming clock. If J=1 and K=1, Q output will toggle at half the frequency of the CLK.

It may help you (or confuse you) to know that internally a flip-flop can be formed by cascading two level-sensitive latches, the first of which is low-level latching and the second one is high-level latching. When the same clock is fed to both latch enables, the first latch will settle its state when the clock signal (its latch enable) is low. The second latch will settle its state when the clock signal (its latch enable) is high. Note that the input of the second latch is the output of the first latch. The end result is an edge-sensitive device.

The naming scheme on the primitives in your image suggests that this design is intended to be implemented in an FPGA.

If this is the case, gating a clock network is not recommended. Clocked logic elements in an FPGA can usually only be clocked by dedicated clock networks. These networks are only available in very limited numbers (i.e, perhaps a dozen on the entire chip!). Instantiating logic which passes a signal from combinational logic to a clock will typically result in one of these networks being used for that signal, making it unavailable for other logic on the chip.

To avoid this, most FPGAs will make logic primitives available with separate combinational logic "enable" signals. (Xilinx calls theirs FDCE/FDPE/FDRE/FDSE depending on the state at reset, and Altera calls theirs DFFE.) These logic elements will (more or less) AND the clock signal with the combinational enable signal, giving the same result as your schematic here without the detrimental effects on clock networks.