ATMEGA microcontrollers like the one in the arduino that are coming straight from the factory can only be programmed using the SPI or JTAG interface.
SPI stands for Serial Peripheral Interface and is a way for microcontrollers to communicate with each other or with the outside world. It's also called 3-wire sometimes because it uses three wires to communicate. To program a chip, you will need a special programmer which reads commands from USB to drive the SPI lines to program the chip. A popular one seems to be the USBTinyISP from Adafruit. A very good introduction into SPI programming is at SparkFun. The most popular applications for programming Atmel AVR chips are avrdude (cmd line), ponyprog (doesn't work with newer programmers) and in some cases AVR Studio (if your programmer supports it). The advantage of SPI programming is that you can program any Atmel chip straight from the factory so you wouldn't always need an Arduino in your projects.
Where SPI is "just another" serial protocol, JTAG is a protocol which is especially designed to program and debug microcontrollers. Not all Atmel micro's support JTAG but the ones that are used in the Arduino do. The JTAG protocol can be used for cool things like "in circuit emulation" and debugging which means that it enables you to see the state of the program in your microcontroller while it's actually running. To do this you'll need a special programmer. Seen my answer for another question.
To program a chip using USB, you'll have to program it first with a "bootloader" using SPI or JTAG. Once loaded with the bootloader, the system will be programmable from any PC using a USB-Serial converter. The downside is that the bootloader takes up some memory space and this method does not allow you to see the state of the chip while it's running.
I don't know what you mean by "UWB" (use standard or common abbreviations, no I'm not going to look it up, it's your job to explain), but many many micros have 10 bit A/Ds and SPI hardware. Even without the SPI hardware, SPI is simple to do in firmware by controlling the I/O lines directly.
In the Microchip line, there is a wide spectrum that meet these requirements. A low end PIC 16 can be small, cheap, and very low power. A fast dsPIC33 can run up to 40 MIPS but of course will use more power. There are various PIC 18 and PIC 24 in between.
What you need to explain is how fast you need to sample the 10 bit A/D and what the micro needs to do to these 10 bit values before passing them on via SPI.
This "answer" is more of a comment because too much important information is lacking. It can be turned into a answer if you cooperate and answer the specific questions asked, not what you feel like answering or or you think is important. As it stands, this question is too vague to be reasonably answered and should be closed. People will come by and close it as they encounter it. When 5 close votes are cast, it's over. The clock is ticking. You may have only minutes to a few hours. Do what I said exactly as I said quickly and you may get your answer. Ignore it and not cooperate and you'll be sent home without a cookie.
Added:
You have now added that the A/D sample rate is 500 kHz and that this raw A/D data is to be passed on via SPI. Since the A/D is 10 bits, this is apparently where you got the 5 Mb/s SPI data requirement from.
This is doable, but will require a reasonably high end micro. The limiting factor is the 10 bit A/D at 500 kHz sample rate. That's quite fast for a micro, so that limits the available options. Another thing to consider is that there is more to SPI than just sending the bits. Bytes may need to be transferred in chunks with chip select asserted and de-asserted per chunk. For example, how will this 10 bit data be packed into 8 bit bytes, or will it at all?
The main operating loop of the firmware will be quite simple. You probably set up the A/D to do automatic periodic conversions and interrupt every 2µs with a new value. Now you've got most of 2µs to send it out the SPI. If the device really can just accept a stream of bits, then it might be easier to do the SPI in firmware. Most SPI hardware wants to send 8 or 16 bits at a time. You'd have to buffer bits and send a 16 bit word 5 out of every 8 interrupts. It might be easier to just send 10 bits each interrupt in firmware.
Sending SPI bits in firmware if you only need to control clock and data out is pretty easy. Per bit, you have to:
- Write bit value to data line.
- Raise clock
- Lower clock
It would make sense to unroll this loop with preprocessor logic or something. A PIC 24H can run at up to 40 MIPS, so you have 80 instructions per interrupt. Obviously you can't use 8 instructions to send each bit. If you can do it in 6 it should work. There is some overhead to get into and out of each interrupt, so you might make the whole thing a polling loop waiting for the A/D, but then the processor can't do anything else. I'd probably try to cram this into the A/D interrupt routine using every possible trick so that at least a few forground cycles are left over for background tasks like knowing when to stop, etc.
Check out the Microchip PIC 24H line. I think most if not all have A/Ds that can do 500 kbit/s, and they can all run at least up to 40 MIPS. The new E series is even faster, but I'm not sure how real that is yet.
Best Answer
An FT2232H is not a micro-controler, it has no FLASH memory that holds code. It is configured via its USB interface.
Your circuit does show an expreal SPI eeprom, you might need to put the appropraite content in that eeprom. You can do this via the FT chip, using a PC application.